Package: BayesianReasoning 0.4.2.9000

BayesianReasoning: Plot Positive and Negative Predictive Values for Medical Tests

Functions to plot and help understand positive and negative predictive values (PPV and NPV), and their relationship with sensitivity, specificity, and prevalence. See Akobeng, A.K. (2007) <doi:10.1111/j.1651-2227.2006.00180.x> for a theoretical overview of the technical concepts and Navarrete et al. (2015) for a practical explanation about the importance of their understanding <doi:10.3389/fpsyg.2015.01327>.

Authors:Gorka Navarrete [aut, cre]

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NEWS

# Install 'BayesianReasoning' in R:
install.packages('BayesianReasoning', repos = c('https://gorkang.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/gorkang/bayesianreasoning/issues

On CRAN:

bayesian-inferencenegative-predictive-valuepositive-predictive-value

6 exports 8 stars 1.65 score 81 dependencies 14 scripts 315 downloads

Last updated 5 months agofrom:f382c4a004. Checks:OK: 1 ERROR: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 09 2024
R-4.5-winERRORSep 09 2024
R-4.5-linuxERRORSep 09 2024
R-4.4-winERRORSep 09 2024
R-4.4-macERRORSep 09 2024
R-4.3-winERRORSep 09 2024
R-4.3-macERRORSep 09 2024

Exports:%>%min_possible_prevalenceplot_cutoffPPV_diagnostic_vs_screeningPPV_heatmapremove_layers_cutoff_plot

Dependencies:base64encbigDbitopsbslibcachemclicolorspacecommonmarkcpp11curldigestdplyrevaluatefansifarverfastmapfontawesomefsgenericsggforceggplot2ggtextgluegridtextgtgtablehighrhtmltoolshtmlwidgetsisobandjpegjquerylibjsonlitejuicyjuiceknitrlabelinglatticelifecyclemagrittrmarkdownMASSMatrixmemoisemgcvmimemunsellnlmepillarpkgconfigplyrpngpolyclippurrrR6rappdirsRColorBrewerRcppRcppEigenreactablereactRreshape2rlangrmarkdownsassscalesstringistringrsystemfontstibbletidyrtidyselecttinytextweenrutf8V8vctrsviridisLitewithrxfunxml2yaml

Introduction to BayesianReasoning

Rendered fromintroduction.Rmdusingknitr::rmarkdownon Sep 09 2024.

Last update: 2023-11-14
Started: 2018-09-28

Screening tests and PPV vs NPV

Rendered fromPPV_NPV.Rmdusingknitr::rmarkdownon Sep 09 2024.

Last update: 2024-03-03
Started: 2020-07-03