Package: BayesianReasoning 0.4.3

BayesianReasoning: Plot Positive and Negative Predictive Values for Medical Tests

Functions to plot and help understand positive and negative predictive values (PPV and NPV), and their relationship with sensitivity, specificity, and prevalence. See Akobeng, A.K. (2007) <doi:10.1111/j.1651-2227.2006.00180.x> for a theoretical overview of the technical concepts and Navarrete et al. (2015) for a practical explanation about the importance of their understanding <doi:10.3389/fpsyg.2015.01327>.

Authors:Gorka Navarrete [aut, cre]

BayesianReasoning_0.4.3.tar.gz
BayesianReasoning_0.4.3.zip(r-4.7-any)BayesianReasoning_0.4.3.zip(r-4.6-any)BayesianReasoning_0.4.3.zip(r-4.5-any)
BayesianReasoning_0.4.3.tgz(r-4.6-any)BayesianReasoning_0.4.3.tgz(r-4.5-any)
BayesianReasoning_0.4.3.tar.gz(r-4.7-any)BayesianReasoning_0.4.3.tar.gz(r-4.6-any)
BayesianReasoning_0.4.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
BayesianReasoning/json (API)

# Install 'BayesianReasoning' in R:
install.packages('BayesianReasoning', repos = c('https://gorkang.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/gorkang/bayesianreasoning/issues

On CRAN:

Conda:

bayesian-inferencenegative-predictive-valuepositive-predictive-value

5.16 score 8 stars 18 scripts 522 downloads 6 exports 75 dependencies

Last updated from:41749c984a. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develOK218
source / vignettesOK180
linux-releaseOK217
macos-releaseOK208
macos-oldrelOK225
windows-develOK128
windows-releaseOK116
windows-oldrelOK125
wasm-releaseOK119

Exports:%>%min_possible_prevalenceplot_cutoffPPV_diagnostic_vs_screeningPPV_heatmapremove_layers_cutoff_plot

Dependencies:base64encbigDbitopsbslibcachemclicommonmarkcpp11curldigestdplyrevaluatefarverfastmapfontawesomefsgenericsggforceggplot2ggtextgluegridtextgtgtablehighrhtmltoolshtmlwidgetsisobandjpegjquerylibjsonlitejuicyjuiceknitrlabelinglifecyclelitedownmagrittrmarkdownMASSmemoisemimepillarpkgconfigplyrpngpolyclippurrrR6rappdirsRColorBrewerRcppreactablereactRreshape2rlangrmarkdownS7sassscalesstringistringrsystemfontstibbletidyrtidyselecttinytextweenrutf8V8vctrsviridisLitewithrxfunxml2yaml

Introduction to BayesianReasoning
Bayesian reasoning | Bayesian reasoning in medical contexts | PPV_heatmap() | NPV | Area overlay | Line overlay | PPV_diagnostic_vs_screening() | min_possible_prevalence() | plot_cutoff()
Rendered fromintroduction.Rmdusingknitr::rmarkdown

Last update: 2025-06-20
Started: 2018-09-28

Screening tests and PPV vs NPV
PPV and NPV definitions | Example | PPV | NPV | Combined PPV + NPV | Sources
Rendered fromPPV_NPV.Rmdusingknitr::rmarkdown

Last update: 2025-06-20
Started: 2020-07-03